Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ALG1L8P-201ENST00000533887 760 ntBASIC23.02■■□□□ 1.28
RXRBP28702 MIR4453-201ENST00000584019 89 ntBASIC23.02■■□□□ 1.28
RXRBP28702 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC23.02■■□□□ 1.28
RXRBP28702 MIR6787-201ENST00000616675 61 ntBASIC23.02■■□□□ 1.28
RXRBP28702 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC23.02■■□□□ 1.28
RXRBP28702 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.02■■□□□ 1.28
RXRBP28702 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.02■■□□□ 1.28
RXRBP28702 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RXRBP28702 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
RXRBP28702 AC018445.3-201ENST00000624177 1945 ntBASIC23.02■■□□□ 1.28
RXRBP28702 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
RXRBP28702 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC23.01■■□□□ 1.27
RXRBP28702 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RXRBP28702 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RXRBP28702 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RXRBP28702 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC23.01■■□□□ 1.27
RXRBP28702 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RXRBP28702 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
RXRBP28702 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC23.01■■□□□ 1.27
RXRBP28702 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC23.01■■□□□ 1.27
RXRBP28702 STK19B-204ENST00000512515 211 ntBASIC23.01■■□□□ 1.27
RXRBP28702 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC23.01■■□□□ 1.27
RXRBP28702 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC23.01■■□□□ 1.27
RXRBP28702 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC23.01■■□□□ 1.27
RXRBP28702 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RXRBP28702 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.01■■□□□ 1.27
RXRBP28702 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RXRBP28702 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC23.01■■□□□ 1.27
RXRBP28702 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RXRBP28702 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RXRBP28702 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RXRBP28702 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23■■□□□ 1.27
RXRBP28702 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23■■□□□ 1.27
RXRBP28702 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
RXRBP28702 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 RPF1-202ENST00000370656 724 ntTSL 2 BASIC23■■□□□ 1.27
RXRBP28702 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 DGCR5-201ENST00000399539 862 ntBASIC23■■□□□ 1.27
RXRBP28702 AC092506.1-202ENST00000401022 528 ntBASIC23■■□□□ 1.27
RXRBP28702 AP006294.1-201ENST00000415407 339 ntBASIC23■■□□□ 1.27
RXRBP28702 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23■■□□□ 1.27
RXRBP28702 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23■■□□□ 1.27
RXRBP28702 MIR4538-201ENST00000581377 78 ntBASIC23■■□□□ 1.27
RXRBP28702 MIR4259-201ENST00000584466 101 ntBASIC23■■□□□ 1.27
RXRBP28702 AL645728.2-201ENST00000641974 660 ntBASIC23■■□□□ 1.27
RXRBP28702 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RXRBP28702 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC23■■□□□ 1.27
RXRBP28702 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23■■□□□ 1.27
RXRBP28702 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC22.99■■□□□ 1.27
RXRBP28702 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.99■■□□□ 1.27
RXRBP28702 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC22.99■■□□□ 1.27
RXRBP28702 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 GABARAPL3-202ENST00000624044 1851 ntBASIC22.99■■□□□ 1.27
RXRBP28702 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RXRBP28702 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC22.99■■□□□ 1.27
RXRBP28702 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC22.99■■□□□ 1.27
RXRBP28702 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC22.99■■□□□ 1.27
RXRBP28702 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22.99■■□□□ 1.27
RXRBP28702 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.99■■□□□ 1.27
RXRBP28702 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RXRBP28702 AL161645.1-201ENST00000622716 1255 ntBASIC22.99■■□□□ 1.27
RXRBP28702 GPR182-203ENST00000622922 591 ntBASIC22.99■■□□□ 1.27
RXRBP28702 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.99■■□□□ 1.27
RXRBP28702 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RXRBP28702 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.99■■□□□ 1.27
RXRBP28702 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.99■■□□□ 1.27
RXRBP28702 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RXRBP28702 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.98■■□□□ 1.27
RXRBP28702 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RXRBP28702 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RXRBP28702 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RXRBP28702 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.98■■□□□ 1.27
RXRBP28702 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RXRBP28702 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RXRBP28702 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RXRBP28702 ELK2AP-201ENST00000392510 1007 ntBASIC22.98■■□□□ 1.27
RXRBP28702 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC22.98■■□□□ 1.27
RXRBP28702 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RXRBP28702 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC22.98■■□□□ 1.27
RXRBP28702 PFAS-212ENST00000625942 396 ntTSL 5 BASIC22.98■■□□□ 1.27
RXRBP28702 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms