Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC6P09630 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC6P09630 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.95■□□□□ 0.78
HOXC6P09630 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.95■□□□□ 0.78
HOXC6P09630 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC6P09630 AC126763.1-201ENST00000552015 2118 ntBASIC19.95■□□□□ 0.78
HOXC6P09630 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.95■□□□□ 0.78
HOXC6P09630 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC6P09630 AC096734.2-201ENST00000562054 433 ntBASIC19.95■□□□□ 0.78
HOXC6P09630 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.95■□□□□ 0.78
HOXC6P09630 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC6P09630 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HOXC6P09630 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC6P09630 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HOXC6P09630 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HOXC6P09630 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC6P09630 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
HOXC6P09630 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXC6P09630 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXC6P09630 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC6P09630 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC6P09630 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC6P09630 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC6P09630 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC6P09630 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HOXC6P09630 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC6P09630 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.94■□□□□ 0.78
HOXC6P09630 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC6P09630 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HOXC6P09630 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.94■□□□□ 0.78
HOXC6P09630 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXC6P09630 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.94■□□□□ 0.78
HOXC6P09630 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.94■□□□□ 0.78
HOXC6P09630 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC6P09630 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HOXC6P09630 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HOXC6P09630 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.94■□□□□ 0.78
HOXC6P09630 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
HOXC6P09630 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC6P09630 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC6P09630 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC6P09630 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC6P09630 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXC6P09630 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.93■□□□□ 0.78
HOXC6P09630 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
HOXC6P09630 MRPL20P1-201ENST00000400819 433 ntBASIC19.93■□□□□ 0.78
HOXC6P09630 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.93■□□□□ 0.78
HOXC6P09630 RHOQP3-201ENST00000437982 621 ntBASIC19.93■□□□□ 0.78
HOXC6P09630 CEND1P1-201ENST00000451006 455 ntBASIC19.93■□□□□ 0.78
HOXC6P09630 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.93■□□□□ 0.78
HOXC6P09630 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.93■□□□□ 0.78
HOXC6P09630 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXC6P09630 STK25P1-201ENST00000585406 838 ntBASIC19.93■□□□□ 0.78
HOXC6P09630 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC6P09630 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC6P09630 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC6P09630 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC6P09630 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXC6P09630 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC6P09630 AL138781.2-201ENST00000617896 1843 ntBASIC19.92■□□□□ 0.78
HOXC6P09630 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HOXC6P09630 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC6P09630 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC6P09630 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC6P09630 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC6P09630 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC6P09630 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC6P09630 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC6P09630 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC6P09630 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC6P09630 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXC6P09630 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXC6P09630 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.92■□□□□ 0.78
HOXC6P09630 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC6P09630 AL031432.2-201ENST00000566714 459 ntBASIC19.92■□□□□ 0.78
HOXC6P09630 AL928711.1-201ENST00000570165 459 ntBASIC19.92■□□□□ 0.78
HOXC6P09630 OR7E47P-204ENST00000575924 449 ntBASIC19.92■□□□□ 0.78
HOXC6P09630 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC6P09630 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
HOXC6P09630 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC6P09630 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXC6P09630 AC010507.1-201ENST00000633895 436 ntBASIC19.92■□□□□ 0.78
HOXC6P09630 AC073592.3-201ENST00000625118 1834 ntBASIC19.92■□□□□ 0.78
HOXC6P09630 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HOXC6P09630 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC6P09630 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC6P09630 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms