Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FAM86EP-206ENST00000510506 987 ntBASIC18.4■□□□□ 0.54
CD48P09326 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CD48P09326 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.4■□□□□ 0.54
CD48P09326 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CD48P09326 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.4■□□□□ 0.54
CD48P09326 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.4■□□□□ 0.54
CD48P09326 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
CD48P09326 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
CD48P09326 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.39■□□□□ 0.54
CD48P09326 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.39■□□□□ 0.54
CD48P09326 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CD48P09326 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CD48P09326 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CD48P09326 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CD48P09326 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.39■□□□□ 0.54
CD48P09326 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CD48P09326 AC010460.3-201ENST00000511359 1579 ntBASIC18.39■□□□□ 0.53
CD48P09326 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CD48P09326 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CD48P09326 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CD48P09326 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.39■□□□□ 0.53
CD48P09326 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.39■□□□□ 0.53
CD48P09326 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.39■□□□□ 0.53
CD48P09326 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.39■□□□□ 0.53
CD48P09326 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 AL592071.1-201ENST00000611956 408 ntBASIC18.39■□□□□ 0.53
CD48P09326 AL121956.5-201ENST00000625261 221 ntBASIC18.39■□□□□ 0.53
CD48P09326 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.39■□□□□ 0.53
CD48P09326 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.39■□□□□ 0.53
CD48P09326 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD48P09326 AL138688.1-201ENST00000624851 1594 ntBASIC18.38■□□□□ 0.53
CD48P09326 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.38■□□□□ 0.53
CD48P09326 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CD48P09326 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CD48P09326 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CD48P09326 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.38■□□□□ 0.53
CD48P09326 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.38■□□□□ 0.53
CD48P09326 AC124864.1-201ENST00000623408 392 ntBASIC18.38■□□□□ 0.53
CD48P09326 LINC01451-201ENST00000623792 534 ntBASIC18.38■□□□□ 0.53
CD48P09326 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD48P09326 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.38■□□□□ 0.53
CD48P09326 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.38■□□□□ 0.53
CD48P09326 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CD48P09326 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.38■□□□□ 0.53
CD48P09326 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
CD48P09326 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CD48P09326 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CD48P09326 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CD48P09326 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CD48P09326 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CD48P09326 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CD48P09326 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.37■□□□□ 0.53
CD48P09326 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 AC096633.1-201ENST00000422446 749 ntBASIC18.37■□□□□ 0.53
CD48P09326 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.37■□□□□ 0.53
CD48P09326 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.37■□□□□ 0.53
CD48P09326 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.37■□□□□ 0.53
CD48P09326 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.37■□□□□ 0.53
CD48P09326 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.37■□□□□ 0.53
CD48P09326 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.37■□□□□ 0.53
CD48P09326 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms