Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN1O95832 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN1O95832 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN1O95832 CNN2P11-201ENST00000429351 262 ntBASIC15.86■□□□□ 0.13
CLDN1O95832 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN1O95832 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN1O95832 SPCS2P1-201ENST00000561636 679 ntBASIC15.86■□□□□ 0.13
CLDN1O95832 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.86■□□□□ 0.13
CLDN1O95832 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN1O95832 NKAPP1-205ENST00000585790 367 ntBASIC15.86■□□□□ 0.13
CLDN1O95832 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLDN1O95832 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 AC141586.3-201ENST00000562166 1838 ntBASIC15.86■□□□□ 0.13
CLDN1O95832 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN1O95832 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN1O95832 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN1O95832 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN1O95832 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN1O95832 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN1O95832 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CLDN1O95832 AL161938.1-201ENST00000569833 2180 ntBASIC15.85■□□□□ 0.13
CLDN1O95832 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN1O95832 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
CLDN1O95832 KRT18P2-201ENST00000447938 1258 ntBASIC15.85■□□□□ 0.13
CLDN1O95832 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.85■□□□□ 0.13
CLDN1O95832 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN1O95832 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLDN1O95832 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLDN1O95832 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLDN1O95832 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN1O95832 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN1O95832 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN1O95832 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN1O95832 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN1O95832 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN1O95832 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN1O95832 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CLDN1O95832 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN1O95832 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN1O95832 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 TEX21P-204ENST00000641479 1693 ntBASIC15.84■□□□□ 0.13
CLDN1O95832 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLDN1O95832 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CLDN1O95832 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.84■□□□□ 0.13
CLDN1O95832 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN1O95832 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN1O95832 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CLDN1O95832 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN1O95832 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLDN1O95832 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN1O95832 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CLDN1O95832 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLDN1O95832 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN1O95832 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms