Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
ZNF253O75346 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.88□□□□□ -0.19
ZNF253O75346 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZNF253O75346 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF253O75346 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
ZNF253O75346 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF253O75346 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ZNF253O75346 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
ZNF253O75346 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF253O75346 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZNF253O75346 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ZNF253O75346 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 FAM197Y1-201ENST00000421178 764 ntBASIC13.87□□□□□ -0.19
ZNF253O75346 NUDT16P1-203ENST00000513809 620 ntBASIC13.87□□□□□ -0.19
ZNF253O75346 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.87□□□□□ -0.19
ZNF253O75346 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 FAM197Y4-202ENST00000622692 608 ntBASIC13.87□□□□□ -0.19
ZNF253O75346 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF253O75346 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZNF253O75346 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ZNF253O75346 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF253O75346 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF253O75346 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF253O75346 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
ZNF253O75346 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF253O75346 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 UBALD1-205ENST00000590891 2641 ntBASIC13.86□□□□□ -0.19
ZNF253O75346 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF253O75346 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ZNF253O75346 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ZNF253O75346 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF253O75346 AC097488.1-201ENST00000507834 756 ntBASIC13.86□□□□□ -0.19
ZNF253O75346 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF253O75346 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF253O75346 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF253O75346 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
ZNF253O75346 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.86□□□□□ -0.19
ZNF253O75346 AP001412.1-201ENST00000608405 714 ntBASIC13.86□□□□□ -0.19
ZNF253O75346 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF253O75346 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF253O75346 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF253O75346 AC068418.2-201ENST00000577309 3703 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms