Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.34□□□□□ -0.27
SNAI2O43623 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.34□□□□□ -0.27
SNAI2O43623 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.33□□□□□ -0.27
SNAI2O43623 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.33□□□□□ -0.27
SNAI2O43623 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.33□□□□□ -0.27
SNAI2O43623 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNAI2O43623 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SNAI2O43623 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNAI2O43623 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
SNAI2O43623 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SNAI2O43623 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SNAI2O43623 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.33□□□□□ -0.28
SNAI2O43623 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SNAI2O43623 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.33□□□□□ -0.28
SNAI2O43623 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 AL353807.1-201ENST00000427475 662 ntBASIC13.33□□□□□ -0.28
SNAI2O43623 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
SNAI2O43623 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.33□□□□□ -0.28
SNAI2O43623 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.33□□□□□ -0.28
SNAI2O43623 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.33□□□□□ -0.28
SNAI2O43623 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.33□□□□□ -0.28
SNAI2O43623 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
SNAI2O43623 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
SNAI2O43623 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.33□□□□□ -0.28
SNAI2O43623 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SNAI2O43623 AC126755.1-201ENST00000525846 6405 ntBASIC13.33□□□□□ -0.28
SNAI2O43623 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SNAI2O43623 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.33□□□□□ -0.28
SNAI2O43623 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.33□□□□□ -0.28
SNAI2O43623 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 AL163051.1-201ENST00000569214 1512 ntBASIC13.33□□□□□ -0.28
SNAI2O43623 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SNAI2O43623 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SNAI2O43623 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.33□□□□□ -0.28
SNAI2O43623 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SNAI2O43623 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNAI2O43623 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SNAI2O43623 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
SNAI2O43623 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
SNAI2O43623 AC104771.1-201ENST00000603335 964 ntBASIC13.32□□□□□ -0.28
SNAI2O43623 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 CROCCP2-202ENST00000412962 2773 ntBASIC13.32□□□□□ -0.28
SNAI2O43623 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms