Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HOXA2O43364 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA2O43364 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA2O43364 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA2O43364 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HOXA2O43364 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
HOXA2O43364 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HOXA2O43364 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA2O43364 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA2O43364 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA2O43364 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 GPR89P-201ENST00000407924 1495 ntBASIC18.91■□□□□ 0.62
HOXA2O43364 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
HOXA2O43364 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXA2O43364 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 AC211486.1-202ENST00000416371 468 ntBASIC18.91■□□□□ 0.62
HOXA2O43364 RPS8P6-201ENST00000426177 609 ntBASIC18.91■□□□□ 0.62
HOXA2O43364 AC211476.1-201ENST00000503899 468 ntBASIC18.91■□□□□ 0.62
HOXA2O43364 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXA2O43364 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXA2O43364 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXA2O43364 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXA2O43364 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXA2O43364 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HOXA2O43364 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXA2O43364 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.91■□□□□ 0.62
HOXA2O43364 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA2O43364 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA2O43364 AC009336.1-201ENST00000608941 1553 ntBASIC18.9■□□□□ 0.62
HOXA2O43364 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA2O43364 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA2O43364 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA2O43364 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HOXA2O43364 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXA2O43364 KRT18P2-201ENST00000447938 1258 ntBASIC18.9■□□□□ 0.62
HOXA2O43364 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA2O43364 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 AC005829.1-201ENST00000570002 483 ntBASIC18.9■□□□□ 0.62
HOXA2O43364 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXA2O43364 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXA2O43364 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA2O43364 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXA2O43364 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA2O43364 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA2O43364 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA2O43364 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA2O43364 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA2O43364 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.62
HOXA2O43364 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA2O43364 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXA2O43364 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA2O43364 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXA2O43364 AC009949.1-201ENST00000623048 1830 ntBASIC18.89■□□□□ 0.61
HOXA2O43364 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA2O43364 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA2O43364 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA2O43364 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
HOXA2O43364 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA2O43364 AP006288.1-201ENST00000446065 395 ntBASIC18.89■□□□□ 0.61
HOXA2O43364 HCG4B-203ENST00000450128 991 ntBASIC18.89■□□□□ 0.61
HOXA2O43364 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXA2O43364 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA2O43364 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HOXA2O43364 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXA2O43364 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXA2O43364 AC010654.1-201ENST00000615722 808 ntBASIC18.89■□□□□ 0.61
HOXA2O43364 GGTLC5P-201ENST00000617623 998 ntBASIC18.89■□□□□ 0.61
HOXA2O43364 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA2O43364 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HOXA2O43364 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
HOXA2O43364 WIZP1-201ENST00000531444 2299 ntBASIC18.89■□□□□ 0.61
HOXA2O43364 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA2O43364 SLC25A24-204ENST00000569674 2357 ntBASIC18.89■□□□□ 0.61
HOXA2O43364 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
HOXA2O43364 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms