Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CUX2O14529 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CUX2O14529 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC30.11■■■□□ 2.41
CUX2O14529 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC30.11■■■□□ 2.41
CUX2O14529 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
CUX2O14529 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
CUX2O14529 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CUX2O14529 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
CUX2O14529 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC30.1■■■□□ 2.41
CUX2O14529 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CUX2O14529 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CUX2O14529 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
CUX2O14529 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 RBPMS2P1-201ENST00000437762 623 ntBASIC30.1■■■□□ 2.41
CUX2O14529 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CUX2O14529 TP53TG3HP-202ENST00000569755 579 ntBASIC30.1■■■□□ 2.41
CUX2O14529 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC30.1■■■□□ 2.41
CUX2O14529 BSG-214ENST00000614867 960 ntTSL 3 BASIC30.1■■■□□ 2.41
CUX2O14529 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CUX2O14529 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC30.1■■■□□ 2.41
CUX2O14529 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC30.1■■■□□ 2.41
CUX2O14529 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CUX2O14529 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC30.09■■■□□ 2.41
CUX2O14529 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
CUX2O14529 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC30.09■■■□□ 2.41
CUX2O14529 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC30.09■■■□□ 2.41
CUX2O14529 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CUX2O14529 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CUX2O14529 HAUS4P1-201ENST00000406739 1145 ntBASIC30.09■■■□□ 2.41
CUX2O14529 AC241585.1-201ENST00000433527 519 ntBASIC30.09■■■□□ 2.41
CUX2O14529 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC30.09■■■□□ 2.41
CUX2O14529 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC30.09■■■□□ 2.41
CUX2O14529 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC30.09■■■□□ 2.41
CUX2O14529 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CUX2O14529 AC093484.2-201ENST00000580996 2166 ntBASIC30.09■■■□□ 2.41
CUX2O14529 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CUX2O14529 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
CUX2O14529 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CUX2O14529 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CUX2O14529 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC30.08■■■□□ 2.41
CUX2O14529 AC096633.1-201ENST00000422446 749 ntBASIC30.08■■■□□ 2.41
CUX2O14529 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC30.08■■■□□ 2.41
CUX2O14529 PPP6R2P1-201ENST00000450880 1275 ntBASIC30.08■■■□□ 2.41
CUX2O14529 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CUX2O14529 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC30.08■■■□□ 2.41
CUX2O14529 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC30.08■■■□□ 2.41
CUX2O14529 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC30.08■■■□□ 2.41
CUX2O14529 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CUX2O14529 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CUX2O14529 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC30.08■■■□□ 2.41
CUX2O14529 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CUX2O14529 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC30.08■■■□□ 2.41
CUX2O14529 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC30.08■■■□□ 2.41
CUX2O14529 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CUX2O14529 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CUX2O14529 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.41
CUX2O14529 AC138969.3-201ENST00000546612 1459 ntBASIC30.07■■■□□ 2.41
CUX2O14529 AC138932.2-201ENST00000548268 1459 ntBASIC30.07■■■□□ 2.41
CUX2O14529 AC126755.4-201ENST00000549796 1459 ntBASIC30.07■■■□□ 2.41
CUX2O14529 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CUX2O14529 FAM86MP-201ENST00000340703 885 ntBASIC30.07■■■□□ 2.4
CUX2O14529 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC30.07■■■□□ 2.4
CUX2O14529 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CUX2O14529 NKTR-203ENST00000442970 646 ntTSL 2 BASIC30.07■■■□□ 2.4
CUX2O14529 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CUX2O14529 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC30.07■■■□□ 2.4
CUX2O14529 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC30.07■■■□□ 2.4
CUX2O14529 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CUX2O14529 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC30.07■■■□□ 2.4
CUX2O14529 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CUX2O14529 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC30.07■■■□□ 2.4
CUX2O14529 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CUX2O14529 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CUX2O14529 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
CUX2O14529 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CUX2O14529 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC30.07■■■□□ 2.4
CUX2O14529 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
CUX2O14529 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CUX2O14529 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CUX2O14529 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CUX2O14529 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CUX2O14529 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC30.06■■■□□ 2.4
CUX2O14529 AC026150.2-201ENST00000564693 1156 ntBASIC30.06■■■□□ 2.4
CUX2O14529 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC30.06■■■□□ 2.4
CUX2O14529 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CUX2O14529 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CUX2O14529 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CUX2O14529 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CUX2O14529 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms