Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 TFAMP1-201ENST00000412727 736 ntBASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 AL627223.1-201ENST00000416693 442 ntBASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 AC055876.3-201ENST00000431496 288 ntBASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 DUX4L27-201ENST00000554796 1261 ntBASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 AC051619.7-201ENST00000568314 623 ntBASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 AC138649.4-201ENST00000612222 287 ntBASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 MIR6752-201ENST00000618442 71 ntBASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3H4Q9UPT8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.39■■□□□ 1.02
ZC3H4Q9UPT8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.39■■□□□ 1.02
ZC3H4Q9UPT8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 CR383656.12-201ENST00000549567 513 ntBASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 AL359881.2-201ENST00000602973 570 ntBASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.39■■□□□ 1.01
ZC3H4Q9UPT8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 OR8S1-201ENST00000310194 1080 ntBASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 TSPY16P-201ENST00000449843 468 ntBASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 SIGLEC30P-201ENST00000455569 941 ntBASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 AL512356.2-201ENST00000546955 174 ntBASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ZC3H4Q9UPT8 AL358472.5-202ENST00000641448 1267 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms