Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 VN2R19P-201ENST00000442399 1052 ntBASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 CYMP-203ENST00000474680 1263 ntBASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 SNHG9-202ENST00000564014 471 ntBASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 AL049757.1-201ENST00000616842 1596 ntBASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.21■□□□□ 0.99
HDAC9Q9UKV0 AL031598.1-201ENST00000561511 1773 ntBASIC21.2■□□□□ 0.99
HDAC9Q9UKV0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 AC003669.1-201ENST00000334569 611 ntBASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 AC108073.2-201ENST00000464002 357 ntBASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 BX323043.1-201ENST00000641006 1765 ntBASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 AC098818.2-201ENST00000564925 2320 ntBASIC21.2■□□□□ 0.98
HDAC9Q9UKV0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 FAM8A3P-201ENST00000427218 844 ntBASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 PRSS29P-201ENST00000440800 595 ntBASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 RPS15P9-201ENST00000494093 319 ntBASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 YBX1P5-201ENST00000509441 847 ntBASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 IGHV3-65-201ENST00000523210 341 ntBASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 AC008667.4-201ENST00000607370 168 ntBASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 AP000974.1-201ENST00000623909 2387 ntBASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC9Q9UKV0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 MIR4469-201ENST00000583919 79 ntBASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 AC148477.5-201ENST00000625164 1645 ntBASIC21.18■□□□□ 0.98
HDAC9Q9UKV0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms