Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCNL1Q9UK58 AJ011932.1-201ENST00000621707 465 ntBASIC22.47■■□□□ 1.19
CCNL1Q9UK58 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCNL1Q9UK58 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCNL1Q9UK58 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCNL1Q9UK58 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CCNL1Q9UK58 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.47■■□□□ 1.19
CCNL1Q9UK58 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCNL1Q9UK58 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.47■■□□□ 1.19
CCNL1Q9UK58 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.47■■□□□ 1.19
CCNL1Q9UK58 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 AC006116.8-202ENST00000587620 1550 ntBASIC22.46■■□□□ 1.19
CCNL1Q9UK58 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 AL035252.4-201ENST00000624174 288 ntBASIC22.46■■□□□ 1.19
CCNL1Q9UK58 Z92544.3-201ENST00000624747 417 ntBASIC22.46■■□□□ 1.19
CCNL1Q9UK58 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNL1Q9UK58 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCNL1Q9UK58 PI4KAP1-204ENST00000612579 1703 ntBASIC22.45■■□□□ 1.19
CCNL1Q9UK58 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCNL1Q9UK58 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 AC005034.1-201ENST00000426657 489 ntBASIC22.45■■□□□ 1.18
CCNL1Q9UK58 DDX43P3-201ENST00000441064 443 ntBASIC22.45■■□□□ 1.18
CCNL1Q9UK58 PUDP-206ENST00000540122 825 ntTSL 2 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 DUX4L27-201ENST00000554796 1261 ntBASIC22.45■■□□□ 1.18
CCNL1Q9UK58 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNL1Q9UK58 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.44■■□□□ 1.18
CCNL1Q9UK58 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 PMS2P4-201ENST00000412466 1052 ntBASIC22.44■■□□□ 1.18
CCNL1Q9UK58 AC015922.1-201ENST00000421102 1152 ntBASIC22.44■■□□□ 1.18
CCNL1Q9UK58 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 AC093214.1-201ENST00000511688 1107 ntBASIC22.44■■□□□ 1.18
CCNL1Q9UK58 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 RNA5SP421-201ENST00000516864 134 ntBASIC22.44■■□□□ 1.18
CCNL1Q9UK58 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 AQP6-203ENST00000551733 849 ntTSL 3 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 AC015911.4-201ENST00000588022 1070 ntBASIC22.44■■□□□ 1.18
CCNL1Q9UK58 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.44■■□□□ 1.18
CCNL1Q9UK58 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNL1Q9UK58 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNL1Q9UK58 AC009336.1-201ENST00000608941 1553 ntBASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms