Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 AL353135.1-201ENST00000606729 504 ntBASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 AC006116.8-202ENST00000587620 1550 ntBASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 AC093214.1-201ENST00000511688 1107 ntBASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 AC018445.3-201ENST00000624177 1945 ntBASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CXXC1Q9P0U4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 AC093010.1-201ENST00000473625 1624 ntBASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 CXCL1P1-201ENST00000502804 216 ntBASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 ANO7L1-203ENST00000602586 1720 ntBASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CXXC1Q9P0U4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 RNA5SP421-201ENST00000516864 134 ntBASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 AC109462.3-201ENST00000573934 613 ntBASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.93■□□□□ 0.62
CXXC1Q9P0U4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms