Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 TSPY16P-201ENST00000449843 468 ntBASIC17.95■□□□□ 0.46
PHOX2BQ99453 UGT1A2P-201ENST00000454886 866 ntBASIC17.95■□□□□ 0.46
PHOX2BQ99453 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 AC004835.2-201ENST00000603762 682 ntBASIC17.95■□□□□ 0.46
PHOX2BQ99453 Z99916.3-201ENST00000623422 1080 ntBASIC17.95■□□□□ 0.46
PHOX2BQ99453 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 PGM5P2-202ENST00000637225 1043 ntBASIC17.95■□□□□ 0.46
PHOX2BQ99453 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 AC034236.2-201ENST00000606662 1610 ntBASIC17.94■□□□□ 0.46
PHOX2BQ99453 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.94■□□□□ 0.46
PHOX2BQ99453 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
PHOX2BQ99453 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.94■□□□□ 0.46
PHOX2BQ99453 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PHOX2BQ99453 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 AP002414.1-201ENST00000391405 1147 ntBASIC17.94■□□□□ 0.46
PHOX2BQ99453 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.94■□□□□ 0.46
PHOX2BQ99453 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.94■□□□□ 0.46
PHOX2BQ99453 AC004461.1-201ENST00000412461 403 ntBASIC17.94■□□□□ 0.46
PHOX2BQ99453 AC132872.1-201ENST00000566986 1195 ntBASIC17.94■□□□□ 0.46
PHOX2BQ99453 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 MIR6799-201ENST00000620297 69 ntBASIC17.94■□□□□ 0.46
PHOX2BQ99453 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PHOX2BQ99453 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.94■□□□□ 0.46
PHOX2BQ99453 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.94■□□□□ 0.46
PHOX2BQ99453 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.94■□□□□ 0.46
PHOX2BQ99453 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHOX2BQ99453 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 AC136632.2-201ENST00000512891 861 ntBASIC17.93■□□□□ 0.46
PHOX2BQ99453 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 LINC00628-201ENST00000628516 1289 ntBASIC17.93■□□□□ 0.46
PHOX2BQ99453 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHOX2BQ99453 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.93■□□□□ 0.46
PHOX2BQ99453 Z82202.1-201ENST00000623446 1880 ntBASIC17.92■□□□□ 0.46
PHOX2BQ99453 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PHOX2BQ99453 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHOX2BQ99453 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms