Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 FGFR3P6-201ENST00000457012 610 ntBASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 AF186996.4-201ENST00000467186 377 ntBASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 AD001527.2-201ENST00000622994 785 ntBASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 AC009949.1-201ENST00000623048 1830 ntBASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDK5RAP1Q96SZ6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 SLC25A6P5-201ENST00000435663 894 ntBASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.42■□□□□ 0.54
CDK5RAP1Q96SZ6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 AL356309.3-201ENST00000624132 1934 ntBASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 AC135050.7-201ENST00000624508 2218 ntBASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 FDX1P1-201ENST00000449115 551 ntBASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 FAM197Y8-203ENST00000450145 560 ntBASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 AC073648.2-201ENST00000510116 352 ntBASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP1Q96SZ6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms