Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DNAAF1Q8NEP3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 AC104390.1-201ENST00000555663 520 ntBASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 AP000525.1-201ENST00000608286 694 ntBASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 CROCCP2-202ENST00000412962 2773 ntBASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DNAAF1Q8NEP3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 OR6D1P-203ENST00000641209 4860 ntBASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 TSPY14P-201ENST00000303979 915 ntBASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 TSPY7P-201ENST00000431358 1114 ntBASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 AC007663.1-201ENST00000438948 1240 ntBASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 AC112497.1-201ENST00000624824 639 ntBASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DNAAF1Q8NEP3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms