Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC10.9□□□□□ -0.67
VPS13BQ7Z7G8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 GK-202ENST00000378941 458 ntTSL 3 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AC010654.1-201ENST00000615722 808 ntBASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AC004877.2-201ENST00000623941 599 ntBASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 FAM58DP-201ENST00000428076 619 ntBASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AC010507.1-201ENST00000633895 436 ntBASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 PC-214ENST00000628663 1470 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 NCF1C-201ENST00000438382 1427 ntBASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AP000344.2-201ENST00000512987 629 ntBASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
VPS13BQ7Z7G8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 DUX4L27-201ENST00000554796 1261 ntBASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 AC073592.5-201ENST00000624854 528 ntBASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 TSPY16P-201ENST00000449843 468 ntBASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13BQ7Z7G8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms