Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 AC245100.3-201ENST00000441281 285 ntBASIC12.27□□□□□ -0.44
CSMD3Q7Z407 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD3Q7Z407 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 AC092919.2-201ENST00000623631 1645 ntBASIC12.27□□□□□ -0.45
CSMD3Q7Z407 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 AL353593.2-201ENST00000602529 1483 ntBASIC12.27□□□□□ -0.45
CSMD3Q7Z407 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 KLF4P1-201ENST00000412782 1185 ntBASIC12.27□□□□□ -0.45
CSMD3Q7Z407 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 AC055876.3-201ENST00000431496 288 ntBASIC12.27□□□□□ -0.45
CSMD3Q7Z407 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 AC138649.4-201ENST00000612222 287 ntBASIC12.27□□□□□ -0.45
CSMD3Q7Z407 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD3Q7Z407 ANO7L1-203ENST00000602586 1720 ntBASIC12.27□□□□□ -0.45
CSMD3Q7Z407 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 AC096734.2-201ENST00000562054 433 ntBASIC12.26□□□□□ -0.45
CSMD3Q7Z407 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 AC009093.7-201ENST00000623853 1223 ntBASIC12.26□□□□□ -0.45
CSMD3Q7Z407 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 AC074386.1-202ENST00000463561 864 ntBASIC12.26□□□□□ -0.45
CSMD3Q7Z407 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 AC008667.4-201ENST00000607370 168 ntBASIC12.26□□□□□ -0.45
CSMD3Q7Z407 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.26□□□□□ -0.45
CSMD3Q7Z407 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD3Q7Z407 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms