Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 AC106886.4-201ENST00000623557 2502 ntBASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 CROCCP2-202ENST00000412962 2773 ntBASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 HOXB1-202ENST00000577092 1414 ntBASIC17.3■□□□□ 0.36
RNF111Q6ZNA4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 FAM210CP-201ENST00000445714 574 ntBASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 AL023973.1-201ENST00000624619 620 ntBASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 AL355312.1-201ENST00000407115 2176 ntBASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF111Q6ZNA4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms