Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.5■□□□□ 0.23
UBL4AP11441 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.5■□□□□ 0.23
UBL4AP11441 KRT18P65-201ENST00000439811 1286 ntBASIC16.5■□□□□ 0.23
UBL4AP11441 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.5■□□□□ 0.23
UBL4AP11441 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.5■□□□□ 0.23
UBL4AP11441 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.5■□□□□ 0.23
UBL4AP11441 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.5■□□□□ 0.23
UBL4AP11441 GPR32P1-201ENST00000601788 811 ntBASIC16.5■□□□□ 0.23
UBL4AP11441 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.5■□□□□ 0.23
UBL4AP11441 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBL4AP11441 CICP6-201ENST00000457191 2729 ntBASIC16.5■□□□□ 0.23
UBL4AP11441 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.5■□□□□ 0.23
UBL4AP11441 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.5■□□□□ 0.23
UBL4AP11441 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.5■□□□□ 0.23
UBL4AP11441 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.5■□□□□ 0.23
UBL4AP11441 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
UBL4AP11441 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UBL4AP11441 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.49■□□□□ 0.23
UBL4AP11441 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.49■□□□□ 0.23
UBL4AP11441 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.49■□□□□ 0.23
UBL4AP11441 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.49■□□□□ 0.23
UBL4AP11441 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.49■□□□□ 0.23
UBL4AP11441 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.49■□□□□ 0.23
UBL4AP11441 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.49■□□□□ 0.23
UBL4AP11441 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.49■□□□□ 0.23
UBL4AP11441 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.49■□□□□ 0.23
UBL4AP11441 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.49■□□□□ 0.23
UBL4AP11441 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.49■□□□□ 0.23
UBL4AP11441 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.49■□□□□ 0.23
UBL4AP11441 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.49■□□□□ 0.23
UBL4AP11441 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.49■□□□□ 0.23
UBL4AP11441 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
UBL4AP11441 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL4AP11441 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
UBL4AP11441 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UBL4AP11441 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UBL4AP11441 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 AC068418.2-201ENST00000577309 3703 ntBASIC16.48■□□□□ 0.23
UBL4AP11441 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.48■□□□□ 0.23
UBL4AP11441 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 TSPY12P-201ENST00000421279 868 ntBASIC16.48■□□□□ 0.23
UBL4AP11441 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.48■□□□□ 0.23
UBL4AP11441 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.48■□□□□ 0.23
UBL4AP11441 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.48■□□□□ 0.23
UBL4AP11441 SPDYE13P-201ENST00000445314 798 ntBASIC16.48■□□□□ 0.23
UBL4AP11441 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.48■□□□□ 0.23
UBL4AP11441 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.48■□□□□ 0.23
UBL4AP11441 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
UBL4AP11441 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.48■□□□□ 0.23
UBL4AP11441 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UBL4AP11441 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.48■□□□□ 0.23
UBL4AP11441 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms