Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A2P08572 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A2P08572 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A2P08572 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
COL4A2P08572 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A2P08572 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A2P08572 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
COL4A2P08572 ACTG1P14-201ENST00000446382 1122 ntBASIC17.76■□□□□ 0.43
COL4A2P08572 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL4A2P08572 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
COL4A2P08572 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A2P08572 AL096865.1-201ENST00000606796 927 ntBASIC17.76■□□□□ 0.43
COL4A2P08572 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A2P08572 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A2P08572 AC025580.3-201ENST00000617932 1424 ntBASIC17.76■□□□□ 0.43
COL4A2P08572 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.76■□□□□ 0.43
COL4A2P08572 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A2P08572 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
COL4A2P08572 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL4A2P08572 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.75■□□□□ 0.43
COL4A2P08572 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.75■□□□□ 0.43
COL4A2P08572 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.75■□□□□ 0.43
COL4A2P08572 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.75■□□□□ 0.43
COL4A2P08572 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.75■□□□□ 0.43
COL4A2P08572 AC023141.13-201ENST00000604991 943 ntBASIC17.75■□□□□ 0.43
COL4A2P08572 AC007064.4-201ENST00000637740 555 ntBASIC17.75■□□□□ 0.43
COL4A2P08572 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL4A2P08572 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL4A2P08572 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
COL4A2P08572 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.75■□□□□ 0.43
COL4A2P08572 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
COL4A2P08572 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL4A2P08572 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
COL4A2P08572 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.75■□□□□ 0.43
COL4A2P08572 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.75■□□□□ 0.43
COL4A2P08572 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.75■□□□□ 0.43
COL4A2P08572 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.75■□□□□ 0.43
COL4A2P08572 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL4A2P08572 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL4A2P08572 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.75■□□□□ 0.43
COL4A2P08572 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A2P08572 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A2P08572 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A2P08572 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL4A2P08572 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
COL4A2P08572 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A2P08572 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A2P08572 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
COL4A2P08572 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
COL4A2P08572 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.74■□□□□ 0.43
COL4A2P08572 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.74■□□□□ 0.43
COL4A2P08572 BCRP1-201ENST00000444246 691 ntBASIC17.74■□□□□ 0.43
COL4A2P08572 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.74■□□□□ 0.43
COL4A2P08572 CXCL1P1-201ENST00000502804 216 ntBASIC17.74■□□□□ 0.43
COL4A2P08572 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.74■□□□□ 0.43
COL4A2P08572 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.74■□□□□ 0.43
COL4A2P08572 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
COL4A2P08572 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL4A2P08572 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A2P08572 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.74■□□□□ 0.43
COL4A2P08572 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A2P08572 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A2P08572 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.74■□□□□ 0.43
COL4A2P08572 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A2P08572 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL4A2P08572 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A2P08572 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL4A2P08572 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A2P08572 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
COL4A2P08572 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.73■□□□□ 0.43
COL4A2P08572 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.73■□□□□ 0.43
COL4A2P08572 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.73■□□□□ 0.43
COL4A2P08572 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.73■□□□□ 0.43
COL4A2P08572 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL4A2P08572 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.73■□□□□ 0.43
COL4A2P08572 ACTL9-202ENST00000612068 1252 ntBASIC17.73■□□□□ 0.43
COL4A2P08572 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.73■□□□□ 0.43
COL4A2P08572 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A2P08572 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
COL4A2P08572 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A2P08572 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A2P08572 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A2P08572 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A2P08572 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL4A2P08572 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.73■□□□□ 0.43
COL4A2P08572 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.73■□□□□ 0.43
COL4A2P08572 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A2P08572 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A2P08572 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms