Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.98■□□□□ 0.79
TPM3P06753 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 AC106886.4-201ENST00000623557 2502 ntBASIC19.98■□□□□ 0.79
TPM3P06753 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM3P06753 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 MIR935-201ENST00000401179 91 ntBASIC19.98■□□□□ 0.79
TPM3P06753 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM3P06753 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TPM3P06753 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM3P06753 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TPM3P06753 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 AL391005.1-201ENST00000623953 2435 ntBASIC19.98■□□□□ 0.79
TPM3P06753 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TPM3P06753 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 UBALD1-205ENST00000590891 2641 ntBASIC19.98■□□□□ 0.79
TPM3P06753 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TPM3P06753 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM3P06753 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TPM3P06753 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TPM3P06753 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 DOC2GP-204ENST00000639052 2548 ntBASIC19.98■□□□□ 0.79
TPM3P06753 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TPM3P06753 AGGF1P2-201ENST00000426656 2106 ntBASIC19.97■□□□□ 0.79
TPM3P06753 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM3P06753 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM3P06753 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM3P06753 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM3P06753 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM3P06753 MFAP1P1-201ENST00000442257 1255 ntBASIC19.97■□□□□ 0.79
TPM3P06753 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM3P06753 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM3P06753 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM3P06753 AC073648.6-201ENST00000641589 218 ntBASIC19.97■□□□□ 0.79
TPM3P06753 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM3P06753 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 AC011270.2-201ENST00000624293 2550 ntBASIC19.97■□□□□ 0.79
TPM3P06753 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TPM3P06753 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM3P06753 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM3P06753 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM3P06753 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TPM3P06753 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM3P06753 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TPM3P06753 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TPM3P06753 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.96■□□□□ 0.79
TPM3P06753 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM3P06753 SLC25A1P4-201ENST00000567977 778 ntBASIC19.96■□□□□ 0.79
TPM3P06753 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM3P06753 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
TPM3P06753 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
TPM3P06753 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM3P06753 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TPM3P06753 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TPM3P06753 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM3P06753 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.95■□□□□ 0.78
TPM3P06753 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM3P06753 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.95■□□□□ 0.78
TPM3P06753 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms