Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
RFPL1O75677 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RFPL1O75677 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RFPL1O75677 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.87■□□□□ 0.45
RFPL1O75677 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RFPL1O75677 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.87■□□□□ 0.45
RFPL1O75677 KRT18P48-201ENST00000434763 852 ntBASIC17.87■□□□□ 0.45
RFPL1O75677 AL671277.2-201ENST00000458060 996 ntBASIC17.87■□□□□ 0.45
RFPL1O75677 AL359075.1-203ENST00000462729 1002 ntBASIC17.87■□□□□ 0.45
RFPL1O75677 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RFPL1O75677 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.87■□□□□ 0.45
RFPL1O75677 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.87■□□□□ 0.45
RFPL1O75677 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.87■□□□□ 0.45
RFPL1O75677 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.87■□□□□ 0.45
RFPL1O75677 AC022898.2-201ENST00000616822 1312 ntBASIC17.87■□□□□ 0.45
RFPL1O75677 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.87■□□□□ 0.45
RFPL1O75677 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RFPL1O75677 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
RFPL1O75677 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RFPL1O75677 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RFPL1O75677 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.87■□□□□ 0.45
RFPL1O75677 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 REXO1L11P-201ENST00000620964 1927 ntBASIC17.86■□□□□ 0.45
RFPL1O75677 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RFPL1O75677 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
RFPL1O75677 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RFPL1O75677 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.86■□□□□ 0.45
RFPL1O75677 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.86■□□□□ 0.45
RFPL1O75677 FAM86EP-206ENST00000510506 987 ntBASIC17.86■□□□□ 0.45
RFPL1O75677 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
RFPL1O75677 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.86■□□□□ 0.45
RFPL1O75677 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.86■□□□□ 0.45
RFPL1O75677 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 AL121761.2-201ENST00000598007 1648 ntBASIC17.86■□□□□ 0.45
RFPL1O75677 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.86■□□□□ 0.45
RFPL1O75677 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
RFPL1O75677 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.86■□□□□ 0.45
RFPL1O75677 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFPL1O75677 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RFPL1O75677 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFPL1O75677 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.85■□□□□ 0.45
RFPL1O75677 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RFPL1O75677 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFPL1O75677 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.85■□□□□ 0.45
RFPL1O75677 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.85■□□□□ 0.45
RFPL1O75677 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.85■□□□□ 0.45
RFPL1O75677 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.85■□□□□ 0.45
RFPL1O75677 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.85■□□□□ 0.45
RFPL1O75677 AC093458.2-201ENST00000623150 629 ntBASIC17.85■□□□□ 0.45
RFPL1O75677 AL023973.1-201ENST00000624619 620 ntBASIC17.85■□□□□ 0.45
RFPL1O75677 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.85■□□□□ 0.45
RFPL1O75677 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFPL1O75677 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFPL1O75677 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.84■□□□□ 0.45
RFPL1O75677 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RFPL1O75677 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.84■□□□□ 0.45
RFPL1O75677 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFPL1O75677 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms