Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC7.86□□□□□ -1.15
USH2AO75445 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC7.86□□□□□ -1.15
USH2AO75445 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC7.86□□□□□ -1.15
USH2AO75445 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC7.86□□□□□ -1.15
USH2AO75445 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 TMEM261P1-201ENST00000604899 340 ntBASIC7.86□□□□□ -1.15
USH2AO75445 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
USH2AO75445 AC009102.3-201ENST00000623118 1491 ntBASIC7.86□□□□□ -1.15
USH2AO75445 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
USH2AO75445 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
USH2AO75445 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC7.86□□□□□ -1.15
USH2AO75445 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC7.86□□□□□ -1.15
USH2AO75445 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
USH2AO75445 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
USH2AO75445 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC7.86□□□□□ -1.15
USH2AO75445 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC7.86□□□□□ -1.15
USH2AO75445 AC007541.1-201ENST00000570282 1469 ntBASIC7.86□□□□□ -1.15
USH2AO75445 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC7.86□□□□□ -1.15
USH2AO75445 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC7.86□□□□□ -1.15
USH2AO75445 AC129492.6-201ENST00000611383 1305 ntBASIC7.86□□□□□ -1.15
USH2AO75445 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC7.86□□□□□ -1.15
USH2AO75445 STX3-203ENST00000529177 1571 ntTSL 2 BASIC7.86□□□□□ -1.15
USH2AO75445 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC7.86□□□□□ -1.15
USH2AO75445 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC7.86□□□□□ -1.15
USH2AO75445 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 UBQLN4P1-201ENST00000461599 1801 ntBASIC7.86□□□□□ -1.15
USH2AO75445 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USH2AO75445 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC7.86□□□□□ -1.15
USH2AO75445 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC7.85□□□□□ -1.15
USH2AO75445 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC7.85□□□□□ -1.15
USH2AO75445 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC7.85□□□□□ -1.15
USH2AO75445 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC7.85□□□□□ -1.15
USH2AO75445 AC004233.3-201ENST00000607794 1269 ntBASIC7.85□□□□□ -1.15
USH2AO75445 WNT11-204ENST00000621122 789 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 PALM-208ENST00000592155 2272 ntTSL 4 BASIC7.85□□□□□ -1.15
USH2AO75445 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
USH2AO75445 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC7.85□□□□□ -1.15
USH2AO75445 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC7.85□□□□□ -1.15
USH2AO75445 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC7.85□□□□□ -1.15
USH2AO75445 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC7.85□□□□□ -1.15
USH2AO75445 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC7.85□□□□□ -1.15
USH2AO75445 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC7.85□□□□□ -1.15
USH2AO75445 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
USH2AO75445 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 AC079140.1-201ENST00000508039 487 ntBASIC7.85□□□□□ -1.15
USH2AO75445 RAB43P1-201ENST00000561790 589 ntBASIC7.85□□□□□ -1.15
USH2AO75445 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC7.85□□□□□ -1.15
USH2AO75445 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC7.85□□□□□ -1.15
USH2AO75445 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC7.85□□□□□ -1.15
USH2AO75445 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USH2AO75445 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
USH2AO75445 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms