Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
KLHL41O60662 AL023806.1-201ENST00000603994 1649 ntBASIC17.7■□□□□ 0.42
KLHL41O60662 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL41O60662 AL023284.2-201ENST00000405850 579 ntBASIC17.7■□□□□ 0.42
KLHL41O60662 AL031133.1-201ENST00000406807 723 ntBASIC17.7■□□□□ 0.42
KLHL41O60662 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.7■□□□□ 0.42
KLHL41O60662 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL41O60662 MCCD1P1-208ENST00000445732 328 ntBASIC17.7■□□□□ 0.42
KLHL41O60662 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
KLHL41O60662 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL41O60662 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.7■□□□□ 0.42
KLHL41O60662 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.7■□□□□ 0.42
KLHL41O60662 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.7■□□□□ 0.42
KLHL41O60662 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.7■□□□□ 0.42
KLHL41O60662 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.7■□□□□ 0.42
KLHL41O60662 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.7■□□□□ 0.42
KLHL41O60662 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
KLHL41O60662 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
KLHL41O60662 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 GPAT2P1-201ENST00000444924 1672 ntBASIC17.7■□□□□ 0.42
KLHL41O60662 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
KLHL41O60662 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL41O60662 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL41O60662 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL41O60662 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 KRT18P55-202ENST00000578578 1546 ntBASIC17.69■□□□□ 0.42
KLHL41O60662 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KLHL41O60662 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL41O60662 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.69■□□□□ 0.42
KLHL41O60662 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL41O60662 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL41O60662 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.69■□□□□ 0.42
KLHL41O60662 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL41O60662 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 AC011558.1-201ENST00000623459 338 ntBASIC17.69■□□□□ 0.42
KLHL41O60662 AL358472.4-201ENST00000633140 710 ntBASIC17.69■□□□□ 0.42
KLHL41O60662 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
KLHL41O60662 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL41O60662 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KLHL41O60662 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHL41O60662 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL41O60662 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.68■□□□□ 0.42
KLHL41O60662 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KLHL41O60662 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
KLHL41O60662 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KLHL41O60662 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.68■□□□□ 0.42
KLHL41O60662 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
KLHL41O60662 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KLHL41O60662 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.68■□□□□ 0.42
KLHL41O60662 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.68■□□□□ 0.42
KLHL41O60662 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.68■□□□□ 0.42
KLHL41O60662 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 AP001094.4-201ENST00000579008 2176 ntBASIC17.68■□□□□ 0.42
KLHL41O60662 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.68■□□□□ 0.42
KLHL41O60662 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms