Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB2O43679 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.78■□□□□ 0.44
LDB2O43679 AP002383.4-201ENST00000442518 975 ntBASIC17.78■□□□□ 0.44
LDB2O43679 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
LDB2O43679 TSSC2-201ENST00000450217 709 ntBASIC17.78■□□□□ 0.44
LDB2O43679 AC091607.1-201ENST00000490318 1060 ntBASIC17.78■□□□□ 0.44
LDB2O43679 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.78■□□□□ 0.44
LDB2O43679 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LDB2O43679 AC011840.4-201ENST00000578471 627 ntBASIC17.78■□□□□ 0.44
LDB2O43679 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.78■□□□□ 0.44
LDB2O43679 AC125634.1-201ENST00000438758 1403 ntBASIC17.78■□□□□ 0.44
LDB2O43679 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.78■□□□□ 0.44
LDB2O43679 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB2O43679 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LDB2O43679 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.78■□□□□ 0.44
LDB2O43679 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
LDB2O43679 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LDB2O43679 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB2O43679 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.77■□□□□ 0.44
LDB2O43679 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.77■□□□□ 0.44
LDB2O43679 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LDB2O43679 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.77■□□□□ 0.44
LDB2O43679 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.77■□□□□ 0.44
LDB2O43679 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LDB2O43679 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.77■□□□□ 0.44
LDB2O43679 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.77■□□□□ 0.44
LDB2O43679 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.77■□□□□ 0.44
LDB2O43679 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.77■□□□□ 0.44
LDB2O43679 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.77■□□□□ 0.44
LDB2O43679 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.77■□□□□ 0.44
LDB2O43679 AL138831.2-201ENST00000606564 490 ntBASIC17.77■□□□□ 0.44
LDB2O43679 AC091076.1-201ENST00000610741 619 ntBASIC17.77■□□□□ 0.44
LDB2O43679 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LDB2O43679 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LDB2O43679 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LDB2O43679 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LDB2O43679 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.77■□□□□ 0.44
LDB2O43679 HTR7P1-202ENST00000624664 4411 ntBASIC17.77■□□□□ 0.43
LDB2O43679 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LDB2O43679 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.77■□□□□ 0.43
LDB2O43679 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LDB2O43679 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB2O43679 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB2O43679 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LDB2O43679 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
LDB2O43679 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 UPK3BP1-201ENST00000428678 509 ntBASIC17.76■□□□□ 0.43
LDB2O43679 AC246785.2-201ENST00000432512 513 ntBASIC17.76■□□□□ 0.43
LDB2O43679 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.76■□□□□ 0.43
LDB2O43679 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.76■□□□□ 0.43
LDB2O43679 AP005901.3-202ENST00000581653 237 ntBASIC17.76■□□□□ 0.43
LDB2O43679 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.76■□□□□ 0.43
LDB2O43679 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LDB2O43679 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LDB2O43679 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LDB2O43679 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB2O43679 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LDB2O43679 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB2O43679 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB2O43679 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LDB2O43679 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
LDB2O43679 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LDB2O43679 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LDB2O43679 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms