Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC112907.2-201ENST00000448639 330 ntBASIC16.88■□□□□ 0.29
UPK1AO00322 AC092647.4-201ENST00000457211 535 ntBASIC16.88■□□□□ 0.29
UPK1AO00322 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK1AO00322 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
UPK1AO00322 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.88■□□□□ 0.29
UPK1AO00322 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.88■□□□□ 0.29
UPK1AO00322 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.88■□□□□ 0.29
UPK1AO00322 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.88■□□□□ 0.29
UPK1AO00322 HYMAI.1-201ENST00000620949 238 ntBASIC16.88■□□□□ 0.29
UPK1AO00322 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.88■□□□□ 0.29
UPK1AO00322 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.88■□□□□ 0.29
UPK1AO00322 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 AL138688.1-201ENST00000624851 1594 ntBASIC16.88■□□□□ 0.29
UPK1AO00322 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
UPK1AO00322 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK1AO00322 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 CROCCP2-202ENST00000412962 2773 ntBASIC16.88■□□□□ 0.29
UPK1AO00322 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1AO00322 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.88■□□□□ 0.29
UPK1AO00322 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
UPK1AO00322 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.87■□□□□ 0.29
UPK1AO00322 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.87■□□□□ 0.29
UPK1AO00322 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
UPK1AO00322 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.87■□□□□ 0.29
UPK1AO00322 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.87■□□□□ 0.29
UPK1AO00322 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.87■□□□□ 0.29
UPK1AO00322 TMPOP1-202ENST00000424642 1267 ntBASIC16.87■□□□□ 0.29
UPK1AO00322 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 DUX4L26-201ENST00000489078 1255 ntBASIC16.87■□□□□ 0.29
UPK1AO00322 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
UPK1AO00322 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
UPK1AO00322 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.87■□□□□ 0.29
UPK1AO00322 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
UPK1AO00322 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
UPK1AO00322 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1AO00322 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
UPK1AO00322 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.86■□□□□ 0.29
UPK1AO00322 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UPK1AO00322 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
UPK1AO00322 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.86■□□□□ 0.29
UPK1AO00322 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
UPK1AO00322 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.86■□□□□ 0.29
UPK1AO00322 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
UPK1AO00322 KRT18P48-201ENST00000434763 852 ntBASIC16.86■□□□□ 0.29
UPK1AO00322 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.86■□□□□ 0.29
UPK1AO00322 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.86■□□□□ 0.29
UPK1AO00322 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.86■□□□□ 0.29
UPK1AO00322 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.86■□□□□ 0.29
UPK1AO00322 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.86■□□□□ 0.29
UPK1AO00322 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.86■□□□□ 0.29
UPK1AO00322 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.86■□□□□ 0.29
UPK1AO00322 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.86■□□□□ 0.29
UPK1AO00322 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.86■□□□□ 0.29
UPK1AO00322 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.86■□□□□ 0.29
UPK1AO00322 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
UPK1AO00322 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
UPK1AO00322 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms