Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01548A6NM66 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01548A6NM66 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01548A6NM66 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
LINC01548A6NM66 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 POM121L3P-201ENST00000419331 1163 ntBASIC14.03□□□□□ -0.16
LINC01548A6NM66 AC096633.1-201ENST00000422446 749 ntBASIC14.03□□□□□ -0.16
LINC01548A6NM66 AL450487.1-201ENST00000426799 995 ntBASIC14.03□□□□□ -0.16
LINC01548A6NM66 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 AC009533.2-201ENST00000543664 586 ntBASIC14.03□□□□□ -0.16
LINC01548A6NM66 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 AL121772.3-201ENST00000610840 674 ntBASIC14.03□□□□□ -0.16
LINC01548A6NM66 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 AC097374.2-201ENST00000618617 1306 ntBASIC14.03□□□□□ -0.16
LINC01548A6NM66 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01548A6NM66 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LINC01548A6NM66 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LINC01548A6NM66 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LINC01548A6NM66 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC01548A6NM66 AC008764.6-201ENST00000595909 2069 ntBASIC14.02□□□□□ -0.16
LINC01548A6NM66 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LINC01548A6NM66 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC01548A6NM66 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01548A6NM66 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC01548A6NM66 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms