Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCCD1A6NED2 SNORA78-201ENST00000459373 127 ntBASIC18.92■□□□□ 0.62
RCCD1A6NED2 AC120057.1-201ENST00000483947 663 ntBASIC18.92■□□□□ 0.62
RCCD1A6NED2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 PCDHB19P-201ENST00000570871 2371 ntBASIC18.92■□□□□ 0.62
RCCD1A6NED2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RCCD1A6NED2 FLJ38576-201ENST00000623820 2459 ntBASIC18.92■□□□□ 0.62
RCCD1A6NED2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCCD1A6NED2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCCD1A6NED2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 NEK4P2-201ENST00000580004 1012 ntBASIC18.91■□□□□ 0.62
RCCD1A6NED2 AC008687.5-201ENST00000593746 558 ntBASIC18.91■□□□□ 0.62
RCCD1A6NED2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 AC116407.2-201ENST00000613639 860 ntBASIC18.91■□□□□ 0.62
RCCD1A6NED2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
RCCD1A6NED2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RCCD1A6NED2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 KRT18P65-201ENST00000439811 1286 ntBASIC18.9■□□□□ 0.62
RCCD1A6NED2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RCCD1A6NED2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 PCDHA14-201ENST00000506751 2298 ntBASIC18.9■□□□□ 0.62
RCCD1A6NED2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCCD1A6NED2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RCCD1A6NED2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RCCD1A6NED2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RCCD1A6NED2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RCCD1A6NED2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RCCD1A6NED2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RCCD1A6NED2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms