Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 AC098590.1-201ENST00000468126 897 ntBASIC19.31■□□□□ 0.68
CCDC66A2RUB6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC66A2RUB6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 AC097488.1-201ENST00000507834 756 ntBASIC19.3■□□□□ 0.68
CCDC66A2RUB6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 MIR3180-5-201ENST00000583743 153 ntBASIC19.3■□□□□ 0.68
CCDC66A2RUB6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
CCDC66A2RUB6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 AL096828.2-201ENST00000567259 1965 ntBASIC19.29■□□□□ 0.68
CCDC66A2RUB6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC66A2RUB6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms