Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC140113.3-201ENST00000605663 199 ntBASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 AC066615.1-201ENST00000640911 628 ntBASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV27A0A087WT01 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 CROCCP2-202ENST00000412962 2773 ntBASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 ATP5G1P1-201ENST00000448724 379 ntBASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 AL136038.4-201ENST00000603606 1261 ntBASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 AL391807.1-203ENST00000604392 2365 ntBASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV27A0A087WT01 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV27A0A087WT01 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
TRAV27A0A087WT01 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.14■□□□□ 0.18
TRAV27A0A087WT01 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 AL441883.1-201ENST00000566170 1045 ntBASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 AC116407.2-201ENST00000613639 860 ntBASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV27A0A087WT01 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 KRT8P47-201ENST00000604727 1398 ntBASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 AL138688.1-201ENST00000624851 1594 ntBASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 AC009053.2-201ENST00000563701 2365 ntBASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 KRT18P65-201ENST00000439811 1286 ntBASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV27A0A087WT01 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms