Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 AC113404.2-201ENST00000507884 177 ntBASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV30A0A087WSZ9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 LINC01568-207ENST00000641790 1380 ntBASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 INGX-201ENST00000359239 846 ntBASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 ECEL1P2-202ENST00000465689 757 ntBASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 FAM87A-204ENST00000613235 858 ntBASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV30A0A087WSZ9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 AC012317.2-201ENST00000623305 2251 ntBASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV30A0A087WSZ9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms