Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXRED1Q96CU9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXRED1Q96CU9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXRED1Q96CU9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXRED1Q96CU9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXRED1Q96CU9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXRED1Q96CU9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXRED1Q96CU9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXRED1Q96CU9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXRED1Q96CU9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXRED1Q96CU9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
FOXRED1Q96CU9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
FOXRED1Q96CU9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXRED1Q96CU9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXRED1Q96CU9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXRED1Q96CU9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXRED1Q96CU9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXRED1Q96CU9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXRED1Q96CU9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXRED1Q96CU9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXRED1Q96CU9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXRED1Q96CU9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXRED1Q96CU9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
FOXRED1Q96CU9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
FOXRED1Q96CU9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
FOXRED1Q96CU9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXRED1Q96CU9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXRED1Q96CU9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXRED1Q96CU9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXRED1Q96CU9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXRED1Q96CU9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXRED1Q96CU9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXRED1Q96CU9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXRED1Q96CU9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
FOXRED1Q96CU9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
FOXRED1Q96CU9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.14■□□□□ 0.97
FOXRED1Q96CU9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXRED1Q96CU9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.14■□□□□ 0.97
FOXRED1Q96CU9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXRED1Q96CU9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXRED1Q96CU9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXRED1Q96CU9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXRED1Q96CU9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.14■□□□□ 0.97
FOXRED1Q96CU9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
FOXRED1Q96CU9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXRED1Q96CU9 ABHD17AP4-201ENST00000411545 909 ntBASIC21.13■□□□□ 0.97
FOXRED1Q96CU9 AC021231.2-201ENST00000594613 730 ntBASIC21.13■□□□□ 0.97
FOXRED1Q96CU9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXRED1Q96CU9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXRED1Q96CU9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXRED1Q96CU9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXRED1Q96CU9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
FOXRED1Q96CU9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXRED1Q96CU9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXRED1Q96CU9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
FOXRED1Q96CU9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
FOXRED1Q96CU9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
FOXRED1Q96CU9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXRED1Q96CU9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
FOXRED1Q96CU9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXRED1Q96CU9 AC010501.1-201ENST00000606270 1962 ntBASIC21.1■□□□□ 0.97
FOXRED1Q96CU9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXRED1Q96CU9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXRED1Q96CU9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXRED1Q96CU9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXRED1Q96CU9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXRED1Q96CU9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
FOXRED1Q96CU9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXRED1Q96CU9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXRED1Q96CU9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
FOXRED1Q96CU9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXRED1Q96CU9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXRED1Q96CU9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXRED1Q96CU9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
FOXRED1Q96CU9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXRED1Q96CU9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXRED1Q96CU9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXRED1Q96CU9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXRED1Q96CU9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXRED1Q96CU9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.07■□□□□ 0.96
FOXRED1Q96CU9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXRED1Q96CU9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.07■□□□□ 0.96
FOXRED1Q96CU9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXRED1Q96CU9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
FOXRED1Q96CU9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXRED1Q96CU9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXRED1Q96CU9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
FOXRED1Q96CU9 ZNRF2P2-203ENST00000454624 420 ntBASIC21.06■□□□□ 0.96
FOXRED1Q96CU9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.06■□□□□ 0.96
FOXRED1Q96CU9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXRED1Q96CU9 AC093323.1-202ENST00000635031 2045 ntBASIC21.05■□□□□ 0.96
FOXRED1Q96CU9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXRED1Q96CU9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.05■□□□□ 0.96
FOXRED1Q96CU9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXRED1Q96CU9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXRED1Q96CU9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.04■□□□□ 0.96
FOXRED1Q96CU9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXRED1Q96CU9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXRED1Q96CU9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.04■□□□□ 0.96
FOXRED1Q96CU9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms