Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.56■■□□□ 1.36
Pcdhgb4Q91XX6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
Pcdhgb4Q91XX6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhgb4Q91XX6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhgb4Q91XX6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhgb4Q91XX6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhgb4Q91XX6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhgb4Q91XX6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhgb4Q91XX6 Terc-201ENSMUST00000082862 423 ntBASIC23.55■■□□□ 1.36
Pcdhgb4Q91XX6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhgb4Q91XX6 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.54■■□□□ 1.36
Pcdhgb4Q91XX6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhgb4Q91XX6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhgb4Q91XX6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhgb4Q91XX6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhgb4Q91XX6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Pcdhgb4Q91XX6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.53■■□□□ 1.36
Pcdhgb4Q91XX6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.52■■□□□ 1.36
Pcdhgb4Q91XX6 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.52■■□□□ 1.36
Pcdhgb4Q91XX6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhgb4Q91XX6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhgb4Q91XX6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb4Q91XX6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb4Q91XX6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Pcdhgb4Q91XX6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb4Q91XX6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb4Q91XX6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Pcdhgb4Q91XX6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb4Q91XX6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Pcdhgb4Q91XX6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb4Q91XX6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
Pcdhgb4Q91XX6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb4Q91XX6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb4Q91XX6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb4Q91XX6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb4Q91XX6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Pcdhgb4Q91XX6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb4Q91XX6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb4Q91XX6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb4Q91XX6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhgb4Q91XX6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhgb4Q91XX6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.48■■□□□ 1.35
Pcdhgb4Q91XX6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhgb4Q91XX6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhgb4Q91XX6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhgb4Q91XX6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Pcdhgb4Q91XX6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.47■■□□□ 1.35
Pcdhgb4Q91XX6 Gm6311-201ENSMUST00000073790 878 ntBASIC23.47■■□□□ 1.35
Pcdhgb4Q91XX6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhgb4Q91XX6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Pcdhgb4Q91XX6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhgb4Q91XX6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Pcdhgb4Q91XX6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhgb4Q91XX6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
Pcdhgb4Q91XX6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Pcdhgb4Q91XX6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Pcdhgb4Q91XX6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhgb4Q91XX6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pcdhgb4Q91XX6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.35
Pcdhgb4Q91XX6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhgb4Q91XX6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhgb4Q91XX6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.45■■□□□ 1.34
Pcdhgb4Q91XX6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.45■■□□□ 1.34
Pcdhgb4Q91XX6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhgb4Q91XX6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhgb4Q91XX6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.45■■□□□ 1.34
Pcdhgb4Q91XX6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhgb4Q91XX6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Pcdhgb4Q91XX6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhgb4Q91XX6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Pcdhgb4Q91XX6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhgb4Q91XX6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhgb4Q91XX6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.43■■□□□ 1.34
Pcdhgb4Q91XX6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhgb4Q91XX6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.43■■□□□ 1.34
Pcdhgb4Q91XX6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhgb4Q91XX6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhgb4Q91XX6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhgb4Q91XX6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Pcdhgb4Q91XX6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhgb4Q91XX6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhgb4Q91XX6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhgb4Q91XX6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.42■■□□□ 1.34
Pcdhgb4Q91XX6 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.42■■□□□ 1.34
Pcdhgb4Q91XX6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhgb4Q91XX6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Pcdhgb4Q91XX6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhgb4Q91XX6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhgb4Q91XX6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhgb4Q91XX6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhgb4Q91XX6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhgb4Q91XX6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhgb4Q91XX6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhgb4Q91XX6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Pcdhgb4Q91XX6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhgb4Q91XX6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhgb4Q91XX6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.4■■□□□ 1.34
Pcdhgb4Q91XX6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhgb4Q91XX6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhgb4Q91XX6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms