Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sox21Q811W0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox21Q811W0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox21Q811W0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox21Q811W0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.16■□□□□ 0.5
Sox21Q811W0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox21Q811W0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Sox21Q811W0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sox21Q811W0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox21Q811W0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox21Q811W0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.15■□□□□ 0.5
Sox21Q811W0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sox21Q811W0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox21Q811W0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox21Q811W0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox21Q811W0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox21Q811W0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox21Q811W0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sox21Q811W0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sox21Q811W0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sox21Q811W0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox21Q811W0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox21Q811W0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox21Q811W0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox21Q811W0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox21Q811W0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox21Q811W0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox21Q811W0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox21Q811W0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sox21Q811W0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox21Q811W0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox21Q811W0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox21Q811W0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.12■□□□□ 0.49
Sox21Q811W0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sox21Q811W0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.12■□□□□ 0.49
Sox21Q811W0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox21Q811W0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sox21Q811W0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox21Q811W0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.11■□□□□ 0.49
Sox21Q811W0 Gm44428-201ENSMUST00000204474 874 ntBASIC18.11■□□□□ 0.49
Sox21Q811W0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sox21Q811W0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox21Q811W0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox21Q811W0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox21Q811W0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sox21Q811W0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox21Q811W0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox21Q811W0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sox21Q811W0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox21Q811W0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox21Q811W0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox21Q811W0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox21Q811W0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox21Q811W0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.08■□□□□ 0.48
Sox21Q811W0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox21Q811W0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox21Q811W0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox21Q811W0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox21Q811W0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Sox21Q811W0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox21Q811W0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox21Q811W0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox21Q811W0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox21Q811W0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox21Q811W0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox21Q811W0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sox21Q811W0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox21Q811W0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox21Q811W0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.06■□□□□ 0.48
Sox21Q811W0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sox21Q811W0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox21Q811W0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.06■□□□□ 0.48
Sox21Q811W0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox21Q811W0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sox21Q811W0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sox21Q811W0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox21Q811W0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox21Q811W0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox21Q811W0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox21Q811W0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox21Q811W0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox21Q811W0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox21Q811W0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.04■□□□□ 0.48
Sox21Q811W0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.04■□□□□ 0.48
Sox21Q811W0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox21Q811W0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sox21Q811W0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox21Q811W0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox21Q811W0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox21Q811W0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox21Q811W0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox21Q811W0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sox21Q811W0 Gm5921-201ENSMUST00000075898 882 ntBASIC18.02■□□□□ 0.48
Sox21Q811W0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox21Q811W0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox21Q811W0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox21Q811W0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox21Q811W0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox21Q811W0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox21Q811W0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms