Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smim6Q3U0I6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smim6Q3U0I6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smim6Q3U0I6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smim6Q3U0I6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smim6Q3U0I6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smim6Q3U0I6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smim6Q3U0I6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smim6Q3U0I6 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.43■□□□□ 0.38
Smim6Q3U0I6 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.43■□□□□ 0.38
Smim6Q3U0I6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim6Q3U0I6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Smim6Q3U0I6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim6Q3U0I6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim6Q3U0I6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Smim6Q3U0I6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim6Q3U0I6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smim6Q3U0I6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim6Q3U0I6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim6Q3U0I6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim6Q3U0I6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smim6Q3U0I6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smim6Q3U0I6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smim6Q3U0I6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smim6Q3U0I6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smim6Q3U0I6 Gm16148-201ENSMUST00000119653 893 ntBASIC17.4■□□□□ 0.38
Smim6Q3U0I6 Gm30023-201ENSMUST00000197970 889 ntBASIC17.4■□□□□ 0.38
Smim6Q3U0I6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim6Q3U0I6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smim6Q3U0I6 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.4■□□□□ 0.38
Smim6Q3U0I6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smim6Q3U0I6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smim6Q3U0I6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim6Q3U0I6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.38■□□□□ 0.37
Smim6Q3U0I6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smim6Q3U0I6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.38■□□□□ 0.37
Smim6Q3U0I6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim6Q3U0I6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim6Q3U0I6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.38■□□□□ 0.37
Smim6Q3U0I6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim6Q3U0I6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim6Q3U0I6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smim6Q3U0I6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim6Q3U0I6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim6Q3U0I6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smim6Q3U0I6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Smim6Q3U0I6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smim6Q3U0I6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim6Q3U0I6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim6Q3U0I6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim6Q3U0I6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.35■□□□□ 0.37
Smim6Q3U0I6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim6Q3U0I6 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.35■□□□□ 0.37
Smim6Q3U0I6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.35■□□□□ 0.37
Smim6Q3U0I6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
Smim6Q3U0I6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smim6Q3U0I6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim6Q3U0I6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim6Q3U0I6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Smim6Q3U0I6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim6Q3U0I6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smim6Q3U0I6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim6Q3U0I6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim6Q3U0I6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim6Q3U0I6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smim6Q3U0I6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Smim6Q3U0I6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim6Q3U0I6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim6Q3U0I6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.32■□□□□ 0.36
Smim6Q3U0I6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim6Q3U0I6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smim6Q3U0I6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim6Q3U0I6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smim6Q3U0I6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim6Q3U0I6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim6Q3U0I6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.3■□□□□ 0.36
Smim6Q3U0I6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim6Q3U0I6 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.3■□□□□ 0.36
Smim6Q3U0I6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim6Q3U0I6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smim6Q3U0I6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smim6Q3U0I6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim6Q3U0I6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smim6Q3U0I6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim6Q3U0I6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim6Q3U0I6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim6Q3U0I6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Smim6Q3U0I6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim6Q3U0I6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smim6Q3U0I6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim6Q3U0I6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms