Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Irf1P15314 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Irf1P15314 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf1P15314 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Irf1P15314 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf1P15314 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.36■□□□□ 0.85
Irf1P15314 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf1P15314 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Irf1P15314 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf1P15314 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Irf1P15314 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf1P15314 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.35■□□□□ 0.85
Irf1P15314 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Irf1P15314 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Irf1P15314 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf1P15314 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.34■□□□□ 0.85
Irf1P15314 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf1P15314 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf1P15314 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.34■□□□□ 0.85
Irf1P15314 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf1P15314 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.33■□□□□ 0.85
Irf1P15314 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Irf1P15314 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf1P15314 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf1P15314 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf1P15314 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Irf1P15314 Gm14523-201ENSMUST00000117260 558 ntBASIC20.32■□□□□ 0.84
Irf1P15314 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.32■□□□□ 0.84
Irf1P15314 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf1P15314 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf1P15314 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf1P15314 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf1P15314 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf1P15314 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf1P15314 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.31■□□□□ 0.84
Irf1P15314 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf1P15314 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf1P15314 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf1P15314 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf1P15314 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf1P15314 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf1P15314 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Irf1P15314 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf1P15314 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf1P15314 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf1P15314 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf1P15314 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Irf1P15314 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf1P15314 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf1P15314 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf1P15314 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.29■□□□□ 0.84
Irf1P15314 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Irf1P15314 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Irf1P15314 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Irf1P15314 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.28■□□□□ 0.84
Irf1P15314 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf1P15314 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf1P15314 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Irf1P15314 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.27■□□□□ 0.84
Irf1P15314 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Irf1P15314 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf1P15314 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf1P15314 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Irf1P15314 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Irf1P15314 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Irf1P15314 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf1P15314 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Irf1P15314 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.26■□□□□ 0.83
Irf1P15314 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Irf1P15314 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Irf1P15314 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.25■□□□□ 0.83
Irf1P15314 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Irf1P15314 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.25■□□□□ 0.83
Irf1P15314 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf1P15314 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Irf1P15314 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf1P15314 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf1P15314 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Irf1P15314 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf1P15314 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf1P15314 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf1P15314 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.23■□□□□ 0.83
Irf1P15314 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf1P15314 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.23■□□□□ 0.83
Irf1P15314 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Irf1P15314 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf1P15314 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf1P15314 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Irf1P15314 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf1P15314 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf1P15314 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Irf1P15314 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf1P15314 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf1P15314 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Irf1P15314 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf1P15314 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf1P15314 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Irf1P15314 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Irf1P15314 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf1P15314 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms