Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7n-4A0A075B620 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7n-4A0A075B620 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7n-4A0A075B620 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav7n-4A0A075B620 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7n-4A0A075B620 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav7n-4A0A075B620 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7n-4A0A075B620 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7n-4A0A075B620 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7n-4A0A075B620 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7n-4A0A075B620 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav7n-4A0A075B620 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7n-4A0A075B620 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7n-4A0A075B620 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav7n-4A0A075B620 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7n-4A0A075B620 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav7n-4A0A075B620 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav7n-4A0A075B620 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav7n-4A0A075B620 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav7n-4A0A075B620 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7n-4A0A075B620 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7n-4A0A075B620 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7n-4A0A075B620 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav7n-4A0A075B620 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Gm16148-201ENSMUST00000119653 893 ntBASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Gm30023-201ENSMUST00000197970 889 ntBASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav7n-4A0A075B620 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav7n-4A0A075B620 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav7n-4A0A075B620 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7n-4A0A075B620 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7n-4A0A075B620 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav7n-4A0A075B620 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7n-4A0A075B620 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7n-4A0A075B620 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7n-4A0A075B620 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7n-4A0A075B620 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav7n-4A0A075B620 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav7n-4A0A075B620 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav7n-4A0A075B620 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav7n-4A0A075B620 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav7n-4A0A075B620 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.86■□□□□ 0.29
Trav7n-4A0A075B620 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7n-4A0A075B620 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7n-4A0A075B620 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7n-4A0A075B620 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7n-4A0A075B620 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7n-4A0A075B620 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7n-4A0A075B620 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7n-4A0A075B620 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav7n-4A0A075B620 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Gm8109-201ENSMUST00000194076 746 ntBASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7n-4A0A075B620 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Trav7n-4A0A075B620 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav7n-4A0A075B620 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7n-4A0A075B620 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7n-4A0A075B620 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7n-4A0A075B620 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7n-4A0A075B620 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7n-4A0A075B620 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav7n-4A0A075B620 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7n-4A0A075B620 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Trav7n-4A0A075B620 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7n-4A0A075B620 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7n-4A0A075B620 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7n-4A0A075B620 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.81■□□□□ 0.28
Trav7n-4A0A075B620 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav7n-4A0A075B620 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav7n-4A0A075B620 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav7n-4A0A075B620 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav7n-4A0A075B620 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav7n-4A0A075B620 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav7n-4A0A075B620 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav7n-4A0A075B620 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav7n-4A0A075B620 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms