Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 FAM207BP-201ENST00000447172 505 ntBASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 RN7SL471P-201ENST00000580476 299 ntBASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB1Q9Y5G3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 MCCD1P1-208ENST00000445732 328 ntBASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 KRT16P1-201ENST00000399124 1418 ntBASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGB1Q9Y5G3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 AC130371.2-201ENST00000619443 611 ntBASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 FLJ38576-201ENST00000623820 2459 ntBASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB1Q9Y5G3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PCDHGB1Q9Y5G3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB1Q9Y5G3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB1Q9Y5G3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB1Q9Y5G3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB1Q9Y5G3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB1Q9Y5G3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGB1Q9Y5G3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB1Q9Y5G3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGB1Q9Y5G3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB1Q9Y5G3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGB1Q9Y5G3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB1Q9Y5G3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB1Q9Y5G3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHGB1Q9Y5G3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB1Q9Y5G3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB1Q9Y5G3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms