Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRMT13Q9NUP7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
TRMT13Q9NUP7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 AC254562.1-201ENST00000417586 456 ntBASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 PRSS29P-201ENST00000440800 595 ntBASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 CYMP-203ENST00000474680 1263 ntBASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRMT13Q9NUP7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 IGLL3P-201ENST00000412472 434 ntBASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 CNN2P11-201ENST00000429351 262 ntBASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRMT13Q9NUP7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 SIGLEC30P-201ENST00000455569 941 ntBASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 AC019129.2-201ENST00000609837 1235 ntBASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.42■□□□□ 0.7
TRMT13Q9NUP7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 AC003669.1-201ENST00000334569 611 ntBASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRMT13Q9NUP7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRMT13Q9NUP7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRMT13Q9NUP7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRMT13Q9NUP7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms