Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 AC104819.1-201ENST00000504587 486 ntBASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 AC009533.2-201ENST00000543664 586 ntBASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 BNIP3P18-201ENST00000593976 575 ntBASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.69■■□□□ 1.06
ECHDC1Q9NTX5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 MINOS1P3-201ENST00000457048 203 ntBASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 AL355312.1-201ENST00000407115 2176 ntBASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ECHDC1Q9NTX5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 TP73-AS1-210ENST00000637775 1455 ntBASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
ECHDC1Q9NTX5 LINC00304-203ENST00000565008 1864 ntBASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 AC011467.2-201ENST00000598425 242 ntBASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC1Q9NTX5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ECHDC1Q9NTX5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.65■■□□□ 1.06
ECHDC1Q9NTX5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ECHDC1Q9NTX5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ECHDC1Q9NTX5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms