Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 CHCHD2P8-201ENST00000429873 447 ntBASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 AC246785.2-201ENST00000432512 513 ntBASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 AL138831.2-201ENST00000606564 490 ntBASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.92■□□□□ 0.78
CCSER1Q9C0I3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.91■□□□□ 0.78
CCSER1Q9C0I3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 SIRPAP1-201ENST00000448467 1770 ntBASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 AL645608.8-201ENST00000606034 2086 ntBASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 AC011840.4-201ENST00000578471 627 ntBASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCSER1Q9C0I3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.89■□□□□ 0.78
CCSER1Q9C0I3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CCSER1Q9C0I3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 AC007967.3-201ENST00000434308 558 ntBASIC19.89■□□□□ 0.77
CCSER1Q9C0I3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms