Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC092338.2-201ENST00000568827 1415 ntBASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AC116353.5-201ENST00000638148 1699 ntBASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 TSPY17P-201ENST00000450329 467 ntBASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 HMGB1P8-201ENST00000558211 949 ntBASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AC009712.1-201ENST00000564938 316 ntBASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AP005242.2-201ENST00000580065 1175 ntBASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AC108359.1-201ENST00000616451 1211 ntBASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 AL135905.2-201ENST00000584934 1404 ntBASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC9.04□□□□□ -0.96
KRTAP3-1Q9BYR8 CICP6-201ENST00000457191 2729 ntBASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP3-1Q9BYR8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms