Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.91■□□□□ 0.46
SHDQ96IW2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.91■□□□□ 0.46
SHDQ96IW2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SHDQ96IW2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SHDQ96IW2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.91■□□□□ 0.46
SHDQ96IW2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SHDQ96IW2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHDQ96IW2 AL049757.1-201ENST00000616842 1596 ntBASIC17.91■□□□□ 0.46
SHDQ96IW2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.9■□□□□ 0.46
SHDQ96IW2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SHDQ96IW2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SHDQ96IW2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.9■□□□□ 0.46
SHDQ96IW2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.9■□□□□ 0.46
SHDQ96IW2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.9■□□□□ 0.46
SHDQ96IW2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.9■□□□□ 0.46
SHDQ96IW2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.9■□□□□ 0.46
SHDQ96IW2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.9■□□□□ 0.46
SHDQ96IW2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.9■□□□□ 0.46
SHDQ96IW2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SHDQ96IW2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.9■□□□□ 0.46
SHDQ96IW2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.9■□□□□ 0.46
SHDQ96IW2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHDQ96IW2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.9■□□□□ 0.46
SHDQ96IW2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SHDQ96IW2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
SHDQ96IW2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.89■□□□□ 0.46
SHDQ96IW2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SHDQ96IW2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.89■□□□□ 0.45
SHDQ96IW2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.89■□□□□ 0.45
SHDQ96IW2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 AC093512.1-201ENST00000617969 520 ntBASIC17.89■□□□□ 0.45
SHDQ96IW2 AL513210.1-201ENST00000629608 234 ntBASIC17.89■□□□□ 0.45
SHDQ96IW2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.89■□□□□ 0.45
SHDQ96IW2 AC148477.5-201ENST00000625164 1645 ntBASIC17.89■□□□□ 0.45
SHDQ96IW2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.89■□□□□ 0.45
SHDQ96IW2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SHDQ96IW2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHDQ96IW2 AC025580.3-201ENST00000617932 1424 ntBASIC17.89■□□□□ 0.45
SHDQ96IW2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
SHDQ96IW2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 AL139400.1-201ENST00000366220 510 ntBASIC17.88■□□□□ 0.45
SHDQ96IW2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.88■□□□□ 0.45
SHDQ96IW2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 DUTP2-201ENST00000519164 463 ntBASIC17.88■□□□□ 0.45
SHDQ96IW2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SHDQ96IW2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.88■□□□□ 0.45
SHDQ96IW2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.88■□□□□ 0.45
SHDQ96IW2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 AC091812.2-201ENST00000619081 385 ntBASIC17.88■□□□□ 0.45
SHDQ96IW2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.88■□□□□ 0.45
SHDQ96IW2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SHDQ96IW2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SHDQ96IW2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHDQ96IW2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHDQ96IW2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHDQ96IW2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SHDQ96IW2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms