Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
LRRC46Q96FV0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC46Q96FV0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC46Q96FV0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 SAPCD2P3-201ENST00000455031 850 ntBASIC16.08■□□□□ 0.16
LRRC46Q96FV0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 NSUN5P1-202ENST00000421140 1535 ntBASIC16.08■□□□□ 0.16
LRRC46Q96FV0 NSUN5P2-203ENST00000457352 1529 ntBASIC16.08■□□□□ 0.16
LRRC46Q96FV0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC46Q96FV0 CROCCP3-202ENST00000420820 1947 ntBASIC16.07■□□□□ 0.16
LRRC46Q96FV0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 NUS1P2-201ENST00000417358 873 ntBASIC16.07■□□□□ 0.16
LRRC46Q96FV0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRRC46Q96FV0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 AL357033.4-201ENST00000617703 1807 ntBASIC16.06■□□□□ 0.16
LRRC46Q96FV0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 AL163051.1-201ENST00000569214 1512 ntBASIC16.06■□□□□ 0.16
LRRC46Q96FV0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms