Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 AC107890.1-201ENST00000422478 521 ntBASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 SLC25A6P2-201ENST00000497974 877 ntBASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 AL032819.2-201ENST00000624543 2162 ntBASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 AC093010.1-201ENST00000473625 1624 ntBASIC11.9□□□□□ -0.5
ALMS1Q8TCU4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
ALMS1Q8TCU4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC11.9□□□□□ -0.51
ALMS1Q8TCU4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 AC125807.1-201ENST00000483097 614 ntBASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 RNF165-205ENST00000588679 2904 ntBASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 AC100803.2-201ENST00000562459 1963 ntBASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 AC007064.4-201ENST00000637740 555 ntBASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 KLF2P3-201ENST00000451977 1087 ntBASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 AL606495.2-201ENST00000605867 535 ntBASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 AL135744.1-201ENST00000565098 629 ntBASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 AC018445.3-201ENST00000624177 1945 ntBASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC11.89□□□□□ -0.51
ALMS1Q8TCU4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 SPCS2P4-201ENST00000436160 681 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms