Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 AL662799.1-202ENST00000614205 422 ntBASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 GABARAPL3-202ENST00000624044 1851 ntBASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 DDX43P3-201ENST00000441064 443 ntBASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 AC074386.1-202ENST00000463561 864 ntBASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 AC092919.2-201ENST00000623631 1645 ntBASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 AC132938.6-201ENST00000623828 1655 ntBASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 SIRPAP1-201ENST00000448467 1770 ntBASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC168Q8NDH2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 RPS15P9-201ENST00000494093 319 ntBASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 SPDYE22P-201ENST00000582158 798 ntBASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 AC007064.4-201ENST00000637740 555 ntBASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC168Q8NDH2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 AC003669.1-201ENST00000334569 611 ntBASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 AC004706.3-202ENST00000621574 984 ntBASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 AC132938.5-201ENST00000624980 1813 ntBASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms