Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 AP005117.1-201ENST00000584346 1413 ntBASIC18.49■□□□□ 0.55
SCML4Q8N228 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SCML4Q8N228 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.49■□□□□ 0.55
SCML4Q8N228 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SCML4Q8N228 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.49■□□□□ 0.55
SCML4Q8N228 REXO1L11P-201ENST00000620964 1927 ntBASIC18.49■□□□□ 0.55
SCML4Q8N228 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SCML4Q8N228 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.49■□□□□ 0.55
SCML4Q8N228 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.49■□□□□ 0.55
SCML4Q8N228 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SCML4Q8N228 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SCML4Q8N228 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.49■□□□□ 0.55
SCML4Q8N228 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.49■□□□□ 0.55
SCML4Q8N228 NOC2LP2-201ENST00000407594 1944 ntBASIC18.49■□□□□ 0.55
SCML4Q8N228 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCML4Q8N228 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SCML4Q8N228 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.48■□□□□ 0.55
SCML4Q8N228 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.48■□□□□ 0.55
SCML4Q8N228 MYCLP1-201ENST00000372451 1075 ntBASIC18.48■□□□□ 0.55
SCML4Q8N228 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.48■□□□□ 0.55
SCML4Q8N228 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.48■□□□□ 0.55
SCML4Q8N228 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.48■□□□□ 0.55
SCML4Q8N228 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.48■□□□□ 0.55
SCML4Q8N228 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.48■□□□□ 0.55
SCML4Q8N228 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.48■□□□□ 0.55
SCML4Q8N228 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 AP001269.4-201ENST00000609611 512 ntBASIC18.48■□□□□ 0.55
SCML4Q8N228 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.48■□□□□ 0.55
SCML4Q8N228 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.48■□□□□ 0.55
SCML4Q8N228 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.48■□□□□ 0.55
SCML4Q8N228 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.48■□□□□ 0.55
SCML4Q8N228 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SCML4Q8N228 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCML4Q8N228 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.47■□□□□ 0.55
SCML4Q8N228 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.47■□□□□ 0.55
SCML4Q8N228 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.47■□□□□ 0.55
SCML4Q8N228 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.47■□□□□ 0.55
SCML4Q8N228 RN7SL510P-201ENST00000581311 263 ntBASIC18.47■□□□□ 0.55
SCML4Q8N228 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.47■□□□□ 0.55
SCML4Q8N228 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.47■□□□□ 0.55
SCML4Q8N228 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 AL355877.3-201ENST00000622820 899 ntBASIC18.47■□□□□ 0.55
SCML4Q8N228 AC073592.4-201ENST00000623827 446 ntBASIC18.47■□□□□ 0.55
SCML4Q8N228 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.47■□□□□ 0.55
SCML4Q8N228 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 LINC00304-203ENST00000565008 1864 ntBASIC18.47■□□□□ 0.55
SCML4Q8N228 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SCML4Q8N228 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCML4Q8N228 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.47■□□□□ 0.55
SCML4Q8N228 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.47■□□□□ 0.55
SCML4Q8N228 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCML4Q8N228 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCML4Q8N228 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SCML4Q8N228 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCML4Q8N228 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.46■□□□□ 0.55
SCML4Q8N228 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCML4Q8N228 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCML4Q8N228 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.46■□□□□ 0.55
SCML4Q8N228 AC004870.1-201ENST00000315132 882 ntBASIC18.46■□□□□ 0.55
SCML4Q8N228 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCML4Q8N228 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms