Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC112698.1-201ENST00000510299 916 ntBASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 AL136038.3-201ENST00000561909 1096 ntBASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 AC116407.2-201ENST00000613639 860 ntBASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 AC009949.1-201ENST00000623048 1830 ntBASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC116Q8IYX3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 KRT8P47-201ENST00000604727 1398 ntBASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 TSPY22P-201ENST00000427496 604 ntBASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 MTCL1P1-201ENST00000446207 792 ntBASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 AC011498.5-201ENST00000592027 486 ntBASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 AL590326.2-201ENST00000625139 305 ntBASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC116Q8IYX3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC116Q8IYX3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms