Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 AC125634.1-201ENST00000438758 1403 ntBASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 HCG4P8-203ENST00000443049 980 ntBASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 KRT17P6-201ENST00000453795 1220 ntBASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 Z69720.1-201ENST00000601483 472 ntBASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 AC116407.2-201ENST00000613639 860 ntBASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 AL691432.3-201ENST00000621860 400 ntBASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCUBE3Q8IX30 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 IGHV3-47-201ENST00000425060 335 ntBASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 AC074051.2-201ENST00000565115 352 ntBASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 AL138831.2-201ENST00000606564 490 ntBASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 AC097374.2-201ENST00000618617 1306 ntBASIC18.73■□□□□ 0.59
SCUBE3Q8IX30 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms