Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC60Q8IWA6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 KRT18P55-202ENST00000578578 1546 ntBASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 AL049757.1-201ENST00000616842 1596 ntBASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 AC025062.2-201ENST00000605477 670 ntBASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 AC116407.2-201ENST00000613639 860 ntBASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC60Q8IWA6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 AC103564.2-201ENST00000432853 1299 ntBASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 DDX43P3-201ENST00000441064 443 ntBASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 AC019129.2-201ENST00000609837 1235 ntBASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 FAM215A-202ENST00000632077 792 ntBASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 AC079776.2-201ENST00000641154 1609 ntBASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC60Q8IWA6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 AC243591.1-201ENST00000452967 1364 ntBASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 AL354751.1-201ENST00000412768 1863 ntBASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 AL022342.1-201ENST00000400363 863 ntBASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 RPS2P1-201ENST00000434010 821 ntBASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC60Q8IWA6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC60Q8IWA6 AL353593.2-201ENST00000602529 1483 ntBASIC19.73■□□□□ 0.75
CCDC60Q8IWA6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC60Q8IWA6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC60Q8IWA6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC60Q8IWA6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC60Q8IWA6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms